STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_1302KEGG: tex:Teth514_1530 hypothetical protein; TIGRFAM: stage III sporulation protein AF; PFAM: Sporulation stage III protein AF. (196 aa)    
Predicted Functional Partners:
Tthe_1300
KEGG: tpd:Teth39_1091 hypothetical protein; TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD.
 
  
 0.998
Tthe_1301
KEGG: tpd:Teth39_1092 hypothetical protein; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE.
 
  
 0.991
Tthe_1303
TIGRFAM: stage III sporulation protein AG; KEGG: tex:Teth514_1531 hypothetical protein.
 
  
 0.971
Tthe_1298
KEGG: tpd:Teth39_1089 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB.
 
  
 0.953
Tthe_1299
KEGG: tpd:Teth39_1090 stage III sporulation AC family protein; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein.
  
  
 0.925
Tthe_1304
KEGG: tte:TTE1290 stage III sporulation protein AH.
 
  
 0.919
Tthe_1297
KEGG: tpd:Teth39_1088 AAA ATPase; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase.
 
  
 0.889
Tthe_1329
KEGG: tex:Teth514_1554 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane.
  
   
 0.741
Tthe_0213
KEGG: tpd:Teth39_0182 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
     0.699
Tthe_0212
KEGG: tpd:Teth39_0181 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
     0.654
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.