STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_1643KEGG: tex:Teth514_1411 hypothetical protein. (450 aa)    
Predicted Functional Partners:
Tthe_1642
Flavodoxin/nitric oxide synthase; KEGG: tpd:Teth39_0972 beta-lactamase domain-containing protein; PFAM: flavodoxin/nitric oxide synthase; SMART: beta-lactamase domain protein.
       0.530
Tthe_1399
Sporulation protein, YlmC/YmxH family; KEGG: tpd:Teth39_1199 PRC-barrel domain-containing protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein.
  
     0.465
Tthe_0200
KEGG: tte:TTE2566 hypothetical protein.
  
     0.455
Tthe_0204
KEGG: tex:Teth514_0596 peptidase U57, YabG; TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG.
  
    0.448
Tthe_2652
KEGG: cth:Cthe_1329 putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type.
       0.440
Tthe_0902
PFAM: NMT1/THI5 like domain protein; KEGG: tte:TTE0643 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic components.
  
    0.433
sspI
TIGRFAM: small, acid-soluble spore protein I; KEGG: tte:TTE0998 small acid-soluble spore protein SspI; Belongs to the SspI family.
  
     0.430
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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