STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_1810Sporulation protein YtxC; KEGG: tex:Teth514_2059 hypothetical protein; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC. (292 aa)    
Predicted Functional Partners:
Tthe_1811
KEGG: tpd:Teth39_0761 hypothetical protein.
 
     0.736
Tthe_0266
KEGG: tpd:Teth39_0256 hypothetical protein; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like.
  
     0.732
Tthe_1301
KEGG: tpd:Teth39_1092 hypothetical protein; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE.
  
     0.699
Tthe_1298
KEGG: tpd:Teth39_1089 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB.
  
     0.675
Tthe_1329
KEGG: tex:Teth514_1554 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane.
  
     0.671
Tthe_1809
PFAM: protein of unknown function DUF445; KEGG: tex:Teth514_2058 hypothetical protein.
       0.668
Tthe_1399
Sporulation protein, YlmC/YmxH family; KEGG: tpd:Teth39_1199 PRC-barrel domain-containing protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein.
  
   
 0.657
Tthe_2209
Sporulation protein YyaC; KEGG: tpd:Teth39_1793 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256.
  
     0.652
Tthe_1082
KEGG: tpd:Teth39_1486 hypothetical protein.
  
     0.648
Tthe_0212
KEGG: tpd:Teth39_0181 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
    0.647
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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