STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_1850KEGG: mta:Moth_1859 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (148 aa)    
Predicted Functional Partners:
Tthe_1851
PFAM: major facilitator superfamily MFS_1; KEGG: mta:Moth_1860 major facilitator transporter.
 
   
 0.688
Tthe_0249
KEGG: cce:Ccel_1144 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; DsrE family protein; SirA family protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.649
Tthe_2581
PFAM: outer membrane efflux protein; KEGG: mta:Moth_2342 outer membrane protein-like.
 
  
 0.602
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.452
Tthe_2582
PFAM: copper amine oxidase domain protein; KEGG: dae:Dtox_4154 copper amine oxidase domain protein.
  
   
 0.424
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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