STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_2059PFAM: lipopolysaccharide biosynthesis protein; KEGG: tpd:Teth39_1622 lipopolysaccharide biosynthesis protein. (323 aa)    
Predicted Functional Partners:
Tthe_2060
KEGG: tpd:Teth39_1556 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
  
  
 0.784
Tthe_1848
KEGG: tpd:Teth39_1162 hypothetical protein.
  
     0.678
Tthe_1582
KEGG: tpd:Teth39_1162 hypothetical protein.
  
     0.676
Tthe_2210
PFAM: Spore germination protein-like Gmad2, bacteria; Lipoprotein LpqB, GerMN domain; KEGG: tpd:Teth39_1794 hypothetical protein.
  
     0.652
Tthe_0114
ATPase-like protein, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
 
 0.635
Tthe_1284
KEGG: tte:TTE1269 hypothetical protein.
  
     0.623
Tthe_1789
KEGG: tpd:Teth39_0795 hypothetical protein.
  
    0.592
Tthe_0111
KEGG: tex:Teth514_0070 hypothetical protein.
  
     0.569
Tthe_1791
KEGG: tex:Teth514_2040 hypothetical protein.
  
     0.563
Tthe_1289
KEGG: tpd:Teth39_1079 hypothetical protein.
  
     0.558
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.