STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_2555PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mta:Moth_2225 hypothetical protein. (394 aa)    
Predicted Functional Partners:
Tthe_2557
KEGG: mta:Moth_2227 hypothetical protein.
 
     0.952
Tthe_2556
PFAM: protein of unknown function DUF6 transmembrane; KEGG: mta:Moth_2226 putative small multidrug resistance transmembrane protein.
 
     0.937
Tthe_2558
PFAM: glycosyl transferase family 2; KEGG: cth:Cthe_3099 glycosyl transferase family protein.
 
  
 0.897
Tthe_2601
KEGG: dau:Daud_0727 hypothetical protein.
  
     0.752
Tthe_2559
PFAM: GtrA family protein; KEGG: dae:Dtox_4309 GtrA family protein.
 
  
 0.707
Tthe_1048
KEGG: sth:STH291 hypothetical protein; related to photosystem II stability/assembly factor-like protein.
  
     0.678
Tthe_0239
KEGG: cce:Ccel_1805 hypothetical protein.
  
     0.677
Tthe_0320
PFAM: copper amine oxidase domain protein; UvrB/UvrC protein; KEGG: gym:GYMC10_3589 copper amine oxidase domain protein.
  
     0.610
Tthe_0154
PFAM: copper amine oxidase domain protein; KEGG: gym:GYMC10_1654 copper amine oxidase domain protein.
 
     0.602
Tthe_0134
KEGG: bad:BAD_1030 mannan endo-1,4-beta-mannosidase precursor; PFAM: glycoside hydrolase family 26; Carbohydrate binding module 27; S-layer domain protein; Belongs to the glycosyl hydrolase 26 family.
  
     0.598
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.