STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0063PFAM: protein of unknown function DUF526; KEGG: mms:mma_0167 hypothetical protein. (70 aa)    
Predicted Functional Partners:
Slit_0062
TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: neu:NE0193 Mg(2+) chelatase family protein; SMART: AAA ATPase.
       0.813
Slit_1291
ZipA FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.726
Slit_0011
Conserved hypothetical protein; Manually curated; KEGG: app:CAP2UW1_0048 hypothetical protein.
  
     0.666
Slit_0455
PFAM: Sporulation domain protein; KEGG: har:HEAR2989 hypothetical protein.
  
     0.623
Slit_1403
PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; KEGG: nmu:Nmul_A2416 hypothetical protein.
  
     0.609
Slit_1525
PFAM: protein of unknown function DUF177; KEGG: nmu:Nmul_A1069 hypothetical protein.
  
     0.609
Slit_0508
PFAM: ribonuclease II; KEGG: net:Neut_0498 ribonuclease II.
  
     0.582
Slit_0343
KEGG: gme:Gmet_2381 transmembrane protein.
  
     0.567
Slit_0701
KEGG: nmu:Nmul_A0232 hypothetical protein.
  
     0.538
Slit_1536
KEGG: rpf:Rpic12D_1465 DNA polymerase III, delta prime subunit; TIGRFAM: DNA polymerase III, delta prime subunit.
  
     0.535
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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