STRINGSTRING
Slit_0074 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0074" - Polysaccharide deacetylase in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0074Polysaccharide deacetylase (253 aa)    
Predicted Functional Partners:
Slit_0075
MltA-interacting MipA family protein (273 aa)
 
 
      0.705
Slit_2833
DNA polymerase I (929 aa)
         
  0.540
Slit_1368
Glycosyl transferase family 39 (549 aa)
   
   
  0.506
Slit_0343
Transmembrane protein (547 aa)
   
   
  0.506
Slit_0342
Glycosyl transferase family 39 (554 aa)
   
   
  0.506
Slit_2891
Glycosyl transferase family 2 (304 aa)
   
   
  0.481
Slit_2886
Glycosyl transferase family 2 (280 aa)
   
   
  0.481
Slit_2879
Glycosyl transferase family 2 (252 aa)
   
   
  0.481
Slit_2878
Glycosyl transferase family 2 (279 aa)
   
   
  0.481
Slit_2874
Glycosyl transferase family 2 (304 aa)
   
   
  0.481
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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