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Slit_0078 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0078" - Urea carboxylase-associated protein 2 in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0078Urea carboxylase-associated protein 2 (242 aa)    
Predicted Functional Partners:
Slit_0080
Urea carboxylase (1207 aa)
 
     
  0.957
Slit_0081
Allophanate hydrolase (586 aa)
 
   
  0.915
Slit_0079
Urea carboxylase-associated protein 1 (215 aa)
 
     
0.888
Slit_0090
NMT1/THI5 like domain protein (332 aa)
 
          0.845
Slit_0077
Hypothetical protein (59 aa)
              0.834
Slit_0091
Binding-protein-dependent transport systems inner membrane component (325 aa)
 
          0.615
Slit_0092
ABC transporter (301 aa)
          0.512
Slit_0082
Xylose isomerase (290 aa)
 
          0.474
Slit_2856
acetyl-CoA carboxylase, biotin carboxylase (451 aa)
         
  0.445
gatA
glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) (484 aa)
   
   
  0.436
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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