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Slit_0084 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0084" - XRE family transcriptional regulator in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Experiments
Databases
Textmining
[Homology]
Score
Slit_0084XRE family transcriptional regulator (100 aa)    
Predicted Functional Partners:
Slit_0085
Reverse transcriptase (292 aa)
              0.900
Slit_2548
Hypothetical protein (101 aa)
   
 
  0.838
Slit_0086
Hypothetical protein (377 aa)
              0.598
atpH
ATP synthase F1, subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (177 aa)
       
      0.515
acsA
acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (655 aa)
              0.414
Slit_1195
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine (351 aa)
              0.414
Slit_1194
Binding-protein-dependent transport systems inner membrane component (258 aa)
              0.414
Slit_1193
Binding-protein-dependent transport systems inner membrane component (345 aa)
              0.414
Slit_1192
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (362 aa)
              0.414
Slit_1187
AMP-dependent synthetase and ligase (629 aa)
              0.414
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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