STRINGSTRING
Slit_0125 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0125" - Aldo/keto reductase in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0125Aldo/keto reductase (344 aa)    
Predicted Functional Partners:
Slit_0442
Sodium/hydrogen exchanger (666 aa)
     
  0.834
Slit_1297
TrkA-N domain protein (336 aa)
     
    0.829
Slit_0129
Short-chain dehydrogenase/reductase SDR (262 aa)
 
   
  0.601
Slit_0128
DSBA oxidoreductase (206 aa)
   
      0.597
argS
arginyl-tRNA synthetase (558 aa)
              0.583
Slit_0127
Sporulation domain protein (192 aa)
     
      0.576
Slit_0149
CoA-binding domain protein (139 aa)
   
      0.532
Slit_1343
Aldo/keto reductase (283 aa)
 
   
0.522
Slit_0124
Transmembrane protein (188 aa)
              0.497
Slit_0123
Phosphoesterase PA-phosphatase related protein (209 aa)
              0.483
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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