STRINGSTRING
Slit_0259 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0259" - Integral membrane sensor signal transduction histidine kinase in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0259Integral membrane sensor signal transduction histidine kinase (343 aa)    
Predicted Functional Partners:
Slit_0260
LytTR family transcriptional regulator (254 aa)
 
  0.995
Slit_0261
Transcriptional regulator (230 aa)
         
  0.864
Slit_0262
Integral membrane sensor signal transduction histidine kinase (416 aa)
              0.859
argH
Argininosuccinate lyase (461 aa)
   
        0.761
Slit_2634
Multi-sensor signal transduction histidine kinase (541 aa)
 
        0.542
Slit_2833
DNA polymerase I (929 aa)
         
  0.515
Slit_0007
Peptidoglycan-binding lysin domain protein (359 aa)
   
        0.485
Slit_0263
Hypothetical protein (437 aa)
              0.483
Slit_2120
FimV N-terminal domain protein (902 aa)
   
        0.454
Slit_0933
Efflux transporter, RND family, MFP subunit (311 aa)
   
          0.450
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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