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Slit_0286 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0286" - Diguanylate phosphodiesterase in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0286Diguanylate phosphodiesterase (381 aa)    
Predicted Functional Partners:
Slit_0115
Glutamate synthase (ferredoxin) (1565 aa)
   
 
  0.906
Slit_2003
Diguanylate cyclase with PAS/PAC sensor (581 aa)
 
  0.900
Slit_2226
Diguanylate cyclase with PAS/PAC sensor (1080 aa)
 
 
  0.891
Slit_2565
Diguanylate cyclase with PAS/PAC sensor (961 aa)
 
  0.880
Slit_2160
Diguanylate cyclase with PAS/PAC sensor (1090 aa)
 
  0.841
Slit_2342
Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain (499 aa)
 
  0.814
Slit_0287
Hypothetical protein (112 aa)
              0.805
Slit_1029
Diguanylate cyclase with PAS/PAC sensor (428 aa)
 
          0.799
Slit_2936
CheA signal transduction histidine kinase (1739 aa)
   
 
  0.794
Slit_1236
Diguanylate cyclase (392 aa)
 
          0.789
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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