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Slit_0334 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0334" - 2'-5' RNA ligase in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Slit_03342’-5’ RNA ligase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (183 aa)    
Predicted Functional Partners:
Slit_0335
DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase (142 aa)
              0.859
Slit_0332
Hypothetical protein (538 aa)
 
          0.728
Slit_0333
FAD linked oxidase domain protein (1284 aa)
              0.645
smg
Hypothetical protein (151 aa)
   
          0.637
Slit_1748
Hypothetical protein (824 aa)
 
          0.512
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (341 aa)
     
      0.471
Slit_2835
Hypothetical protein (109 aa)
   
          0.456
Slit_2246
Invasion gene expression up-regulator SirB (139 aa)
   
          0.449
Slit_0127
Sporulation domain protein (192 aa)
   
      0.447
Slit_0981
Glucokinase (329 aa)
   
          0.442
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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