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Slit_0422 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0422" - Crp/Fnr family transcriptional regulator in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0422Crp/Fnr family transcriptional regulator (240 aa)    
Predicted Functional Partners:
Slit_0252
Adenylate/guanylate cyclase with Chase sensor (680 aa)
   
  0.973
Slit_2097
Adenylate/guanylate cyclase (447 aa)
   
  0.950
Slit_2071
Adenylate/guanylate cyclase (458 aa)
   
  0.950
Slit_1739
Adenylate/guanylate cyclase with Chase sensor (595 aa)
   
  0.950
Slit_1543
Adenylate/guanylate cyclase (406 aa)
   
  0.950
Slit_0423
Oxygen-independent coproporphyrinogen III oxidase (467 aa)
 
 
  0.856
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (323 aa)
     
 
  0.785
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (68 aa)
       
      0.771
Slit_2416
Cyclic nucleotide-binding protein (430 aa)
     
  0.752
Slit_2006
Serine/threonine protein kinase (801 aa)
     
  0.752
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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