STRINGSTRING
Slit_0455 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0455" - Sporulation domain protein in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0455Sporulation domain protein (263 aa)    
Predicted Functional Partners:
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor (330 aa)
              0.913
coaX
Transcriptional activator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis (240 aa)
              0.883
Slit_0452
Patatin (397 aa)
              0.859
Slit_0451
Hypothetical protein (79 aa)
              0.859
Slit_0450
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., phosphate acetyltransferase (756 aa)
              0.850
Slit_2924
Hypothetical protein (158 aa)
   
          0.770
Slit_2611
Hypothetical protein (144 aa)
   
          0.762
Slit_1525
Hypothetical protein (159 aa)
   
          0.736
Slit_0940
Hypothetical protein (352 aa)
   
          0.732
Slit_2858
MJ0042 family finger-like protein (262 aa)
   
          0.729
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (8%) [HD]