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Slit_0463 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0463" - RNA-binding S4 domain protein in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0463RNA-binding S4 domain protein (243 aa)    
Predicted Functional Partners:
Slit_0464
Multiple antibiotic resistance (MarC)-related protein (208 aa)
              0.860
Slit_0465
Crp/Fnr family transcriptional regulator (157 aa)
              0.829
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (465 aa)
 
   
  0.781
Slit_2366
Methyltransferase (179 aa)
 
        0.700
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity (359 aa)
 
      0.659
Slit_2199
Radical SAM domain protein (412 aa)
 
      0.645
Slit_2704
Thiamine monophosphate synthase (312 aa)
 
 
  0.642
lnt
Apolipoprotein N-acyltransferase; Transfers the fatty acyl group on membrane lipoproteins (496 aa)
              0.626
Slit_0471
Phospholipid/glycerol acyltransferase (234 aa)
              0.606
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (313 aa)
 
   
  0.590
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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