STRINGSTRING
Slit_0467 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0467" - Excinuclease ABC subunit C in Sideroxydans lithotrophicus
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0467Excinuclease ABC subunit C (87 aa)    
Predicted Functional Partners:
Slit_0471
Phospholipid/glycerol acyltransferase (234 aa)
              0.778
glyS
glycyl-tRNA synthetase, subunit beta (716 aa)
              0.676
glyQ
glycyl-tRNA synthetase, subunit alpha (320 aa)
              0.676
Slit_0470
Histidinol-phosphate phosphatase family protein (177 aa)
              0.643
lnt
Apolipoprotein N-acyltransferase; Transfers the fatty acyl group on membrane lipoproteins (496 aa)
              0.603
Slit_0465
Crp/Fnr family transcriptional regulator (157 aa)
              0.461
Slit_0464
Multiple antibiotic resistance (MarC)-related protein (208 aa)
              0.448
Slit_0463
RNA-binding S4 domain protein (243 aa)
              0.448
Slit_0472
Hypothetical protein (245 aa)
              0.426
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (289 aa)
              0.414
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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