STRINGSTRING
Slit_0484 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0484" - Transcriptional regulator in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0484Transcriptional regulator (242 aa)    
Predicted Functional Partners:
Slit_0483
Integral membrane sensor signal transduction histidine kinase (445 aa)
 
  0.992
Slit_2493
Integral membrane sensor signal transduction histidine kinase (464 aa)
 
  0.923
Slit_0331
PAS/PAC sensor signal transduction histidine kinase (440 aa)
 
  0.916
Slit_2582
Integral membrane sensor hybrid histidine kinase (606 aa)
 
  0.854
Slit_1761
Integral membrane sensor hybrid histidine kinase (587 aa)
 
  0.828
Slit_0281
Integral membrane sensor signal transduction histidine kinase (577 aa)
 
  0.803
Slit_0585
Multi-sensor hybrid histidine kinase (725 aa)
 
  0.791
Slit_1783
CBS sensor signal transduction histidine kinase (442 aa)
 
  0.789
Slit_1289
Multi-sensor hybrid histidine kinase (837 aa)
 
  0.784
Slit_2486
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein (1645 aa)
           
  0.768
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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