STRINGSTRING
Slit_0497 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0497" - General secretion pathway protein F in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0497General secretion pathway protein F (407 aa)    
Predicted Functional Partners:
Slit_0498
General secretory pathway protein E (496 aa)
 
 
  0.982
Slit_0496
General secretion pathway protein G (146 aa)
 
  0.979
Slit_0499
General secretion pathway protein D (690 aa)
 
 
  0.968
Slit_2608
Type II secretion system protein E (567 aa)
 
 
  0.968
Slit_0685
Type II secretion system protein E (568 aa)
 
 
  0.968
Slit_2073
Type II secretion system protein E (592 aa)
 
 
  0.967
Slit_1830
Type II secretion system protein E (561 aa)
 
 
  0.967
Slit_0536
Phytochrome sensor protein (797 aa)
 
 
  0.965
Slit_1832
General secretion pathway protein G (146 aa)
 
  0.939
Slit_2759
Twitching motility protein (347 aa)
 
   
  0.923
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (9%) [HD]