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Slit_0511 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0511" - Hypothetical protein in Sideroxydans lithotrophicus
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Slit_0511Hypothetical protein (243 aa)    
Predicted Functional Partners:
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (183 aa)
   
        0.820
Slit_0973
aspartyl-tRNA synthetase (598 aa)
 
   
  0.729
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing (351 aa)
 
          0.729
Slit_0513
UbiA prenyltransferase (313 aa)
              0.705
Slit_1654
NAD+ synthetase (534 aa)
     
      0.686
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (192 aa)
              0.649
Slit_0517
Protein TolQ (225 aa)
   
        0.636
Slit_0516
Tol-pal system-associated acyl-CoA thioesterase (134 aa)
              0.627
tolB
Tol-Pal system beta propeller repeat protein TolB; Involved in the TonB-independent uptake of proteins (419 aa)
   
      0.616
pheT
phenylalanyl-tRNA synthetase, subunit beta (784 aa)
   
      0.611
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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