Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Slit_0531PFAM: Protein phosphatase 2C-like; KEGG: dar:Daro_3360 protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein. (274 aa)    
Predicted Functional Partners:
Slit_0530
PFAM: Serine/threonine-protein kinase-like domain; CHASE2 domain protein; KEGG: rfr:Rfer_3942 serine/threonine protein kinase with CHASE2 sensor.
 
 
 0.938
Slit_0532
FHA domain containing protein; KEGG: dar:Daro_3359 forkhead-associated; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 0.903
Slit_2416
KEGG: app:CAP2UW1_0788 cyclic nucleotide-binding protein; PFAM: Serine/threonine-protein kinase-like domain; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding.
 0.899
Slit_0312
Cyclic nucleotide-binding protein; KEGG: azo:azo0988 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; cyclic nucleotide-binding; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; cyclic nucleotide-binding.
 0.897
Slit_0314
Cyclic nucleotide-binding protein; KEGG: azo:azo0988 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding.
 0.897
Slit_2507
KEGG: nmu:Nmul_A0515 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 0.891
Slit_1271
KEGG: dar:Daro_0438 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase.
 
 0.878
Slit_0282
KEGG: acr:Acry_2098 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; response regulator receiver; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; response regulator receiver.
 
 0.838
Slit_2006
KEGG: mei:Msip34_0712 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Metal-dependent hydrolase HDOD; GAF domain protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain.
 
 
 0.833
Slit_1052
KEGG: chu:CHU_3405 hypothetical protein.
   
 0.768
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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