STRINGSTRING
Slit_0535 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0535" - Crp/Fnr family transcriptional regulator in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0535Crp/Fnr family transcriptional regulator (358 aa)    
Predicted Functional Partners:
Slit_0537
Metal dependent phosphohydrolase (544 aa)
 
          0.839
Slit_0534
Beta-lactamase domain protein (254 aa)
              0.806
Slit_0533
Adenylate/guanylate cyclase with Chase sensor (725 aa)
 
          0.782
Slit_0536
Phytochrome sensor protein (797 aa)
              0.765
Slit_2800
Crp/Fnr family transcriptional regulator (281 aa)
   
          0.730
Slit_1242
Crp/Fnr family transcriptional regulator (118 aa)
   
          0.620
Slit_2596
Mannose-sensitive agglutinin (MSHA) (209 aa)
   
          0.576
Slit_1543
Adenylate/guanylate cyclase (406 aa)
   
          0.545
Slit_2097
Adenylate/guanylate cyclase (447 aa)
   
          0.511
Slit_0532
FHA domain containing protein (246 aa)
              0.491
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (9%) [HD]