STRINGSTRING
Slit_0537 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0537" - Metal dependent phosphohydrolase in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0537Metal dependent phosphohydrolase (544 aa)    
Predicted Functional Partners:
Slit_0534
Beta-lactamase domain protein (254 aa)
          0.917
Slit_0533
Adenylate/guanylate cyclase with Chase sensor (725 aa)
 
          0.898
Slit_0536
Phytochrome sensor protein (797 aa)
              0.841
Slit_0535
Crp/Fnr family transcriptional regulator (358 aa)
 
          0.839
Slit_0252
Adenylate/guanylate cyclase with Chase sensor (680 aa)
 
          0.834
Slit_2311
Chase2 sensor protein (566 aa)
 
          0.724
Slit_1739
Adenylate/guanylate cyclase with Chase sensor (595 aa)
 
          0.696
Slit_2048
Adenylate/guanylate cyclase with Chase sensor (604 aa)
 
          0.694
Slit_2043
Hypothetical protein (313 aa)
   
          0.691
Slit_2071
Adenylate/guanylate cyclase (458 aa)
 
          0.667
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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