Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Slit_0549KEGG: dze:Dd1591_1545 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver. (132 aa)    
Predicted Functional Partners:
Slit_0550
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
 0.999
Slit_0551
CheA signal transduction histidine kinase; KEGG: azo:azo1462 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein.
 
 0.996
Slit_1588
KEGG: mei:Msip34_2712 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein.
 
 0.991
Slit_0591
KEGG: dar:Daro_0766 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein.
 
 
 0.965
Slit_0590
KEGG: tbd:Tbd_1608 flagellar motor switch/type III secretory pathway protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein.
 
 0.963
Slit_0548
KEGG: azo:azo1459 chemotaxis protein CheV-like; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver.
 
 
 0.949
Slit_0553
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
  
 0.927
Slit_0554
CheB methylesterase; KEGG: neu:NE1859 chemotaxis-specific methylesterase; PFAM: CheB methylesterase.
 
 0.927
Slit_1590
KEGG: two-component system sensor histidine kinase/response regulator, putative; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 
0.920
Slit_0546
TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: csa:Csal_2022 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein.
 
 0.906
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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