STRINGSTRING
Slit_0616 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0616" - Flagellar export chaperone in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0616Flagellar export chaperone (106 aa)    
Predicted Functional Partners:
Slit_0613
YcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (255 aa)
 
          0.947
Slit_0615
Hypothetical protein (357 aa)
 
          0.912
Slit_0617
Flagellar protein FliS (154 aa)
              0.860
Slit_0618
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end (468 aa)
              0.860
Slit_0619
Flagellar protein FlaG protein (123 aa)
 
          0.851
Slit_0614
Type III secretion exporter (113 aa)
              0.816
Slit_1045
Type IV pilus assembly PilZ; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (240 aa)
   
          0.723
Slit_2454
Hypothetical protein (251 aa)
   
          0.683
Slit_1016
Hypothetical protein (253 aa)
   
          0.682
Slit_0562
FlgN family protein (157 aa)
   
          0.678
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (8%) [HD]