STRINGSTRING
Slit_0621 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0621" - Diguanylate cyclase in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Slit_0621Diguanylate cyclase (553 aa)    
Predicted Functional Partners:
Slit_0115
Glutamate synthase (ferredoxin) (1565 aa)
   
 
  0.906
Slit_0622
LuxR family transcriptional regulator (210 aa)
   
 
  0.842
Slit_2936
CheA signal transduction histidine kinase (1739 aa)
   
 
  0.794
Slit_1330
PAS/PAC sensor protein (464 aa)
 
  0.787
Slit_1653
Nitrogen regulatory protein P-II (112 aa)
   
 
  0.769
Slit_0065
Nitrogen regulatory protein P-II (112 aa)
   
 
  0.769
Slit_1237
7TM domain sensor diguanylate cyclase (544 aa)
   
          0.756
Slit_0548
Response regulator receiver modulated CheW protein (315 aa)
 
 
  0.754
Slit_0613
YcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (255 aa)
 
   
  0.744
Slit_1184
Diguanylate phosphodiesterase (505 aa)
 
 
 
  0.722
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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