STRINGSTRING
Slit_0648 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0648" - Stringent starvation protein B in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0648Stringent starvation protein B (134 aa)    
Predicted Functional Partners:
Slit_0647
Glutathione S-transferase domain protein (199 aa)
 
   
  0.982
clpX
ATP-dependent Clp protease ATP-binding protein ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (418 aa)
       
 
  0.821
Slit_0646
Hypothetical protein (338 aa)
              0.816
Slit_0645
Hypothetical protein (178 aa)
              0.766
Slit_0644
Hypothetical protein (176 aa)
              0.766
Slit_0643
Polysulfide reductase NrfD (455 aa)
              0.766
Slit_2158
ATPase AAA (341 aa)
       
 
  0.742
lptA
Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane (195 aa)
   
        0.697
Slit_0642
4Fe-4S ferredoxin, iron-sulfur binding protein (291 aa)
              0.695
Slit_0641
Molybdopterin dinucleotide-binding region (744 aa)
              0.695
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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