STRINGSTRING
Slit_0724 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0724" - Hypothetical protein in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0724Hypothetical protein (89 aa)    
Predicted Functional Partners:
Slit_0725
Aminotransferase class IV (284 aa)
              0.911
Slit_0726
Beta-lactamase (419 aa)
   
        0.904
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (215 aa)
   
   
  0.745
Slit_0727
Hypothetical protein (151 aa)
              0.636
Slit_1525
Hypothetical protein (159 aa)
   
          0.594
Slit_1005
Glutaredoxin 2 (74 aa)
   
 
      0.581
Slit_0722
ABC transporter (294 aa)
              0.565
Slit_0721
ABC transporter (335 aa)
              0.565
Slit_1390
Biopolymer transport protein ExbD/TolR (136 aa)
   
          0.549
Slit_2167
Type 4 fimbrial biogenesis transmembrane protein (152 aa)
 
          0.535
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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