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nifW protein (Sideroxydans lithotrophicus) - STRING interaction network
"nifW" - Nitrogen fixation protein NifW in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifWNitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage (111 aa)    
Predicted Functional Partners:
Slit_0811
NifZ family protein (158 aa)
 
     
  0.975
Slit_0809
Hypothetical protein (173 aa)
 
          0.972
Slit_0808
Serine O-acetyltransferase (261 aa)
              0.900
Slit_0812
Nitrogen fixation protein NifM (282 aa)
 
     
  0.899
Slit_0833
NifQ family protein (185 aa)
 
     
  0.870
Slit_0807
Homocitrate synthase (380 aa)
 
     
  0.851
Slit_0805
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (296 aa)
 
          0.813
Slit_0837
Nitrogenase cofactor biosynthesis protein NifB (501 aa)
 
     
  0.811
Slit_0905
Dinitrogenase iron-molybdenum cofactor biosynthesis protein (137 aa)
 
     
  0.807
Slit_0909
Ferredoxin III, nif-specific (96 aa)
 
     
  0.804
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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