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Slit_0817 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0817" - Extracellular solute-binding protein, family 7 in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0817Extracellular solute-binding protein, family 7 (335 aa)    
Predicted Functional Partners:
Slit_0815
TRAP dicarboxylate transporter, DctM subunit (428 aa)
 
   
  0.981
Slit_0816
Tripartite ATP-independent periplasmic transporter DctQ component (171 aa)
 
          0.976
Slit_0818
Hypothetical protein (285 aa)
 
          0.957
Slit_1409
TRAP dicarboxylate transporter, DctM subunit (431 aa)
 
   
  0.872
Slit_1408
Tripartite ATP-independent periplasmic transporter DctQ component (171 aa)
 
   
  0.808
Slit_2833
DNA polymerase I (929 aa)
           
  0.515
Slit_0814
HicA protein (87 aa)
              0.430
Slit_0813
HicB family protein (167 aa)
              0.418
Slit_0819
Hypothetical protein (276 aa)
              0.400
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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