STRINGSTRING
Slit_0825 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0825" - Hypothetical protein in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0825Hypothetical protein (415 aa)    
Predicted Functional Partners:
Slit_0827
FAD linked oxidase domain protein (493 aa)
 
  0.997
Slit_0826
FAD linked oxidase domain protein (354 aa)
 
 
  0.997
Slit_0824
Serine--pyruvate transaminase (393 aa)
       
    0.986
Slit_2070
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate (217 aa)
         
    0.900
Slit_1754
HAD-superfamily hydrolase, subfamily IA, variant 1 (218 aa)
         
    0.900
Slit_0713
Catalase; Has an organic peroxide-dependent peroxidase activity (340 aa)
         
    0.900
Slit_0279
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate (228 aa)
         
    0.900
Slit_1785
Glycerate kinase (470 aa)
 
   
    0.826
Slit_0823
Iron-sulfur cluster binding protein (477 aa)
 
 
  0.821
Slit_0120
FAD linked oxidase domain protein (470 aa)
   
  0.702
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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