STRINGSTRING
Slit_0831 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0831" - Peptidase S24/S26A/S26B, conserved region in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Slit_0831Peptidase S24/S26A/S26B, conserved region (159 aa)    
Predicted Functional Partners:
Slit_0830
DNA-directed DNA polymerase (426 aa)
 
  0.996
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (341 aa)
   
 
  0.919
Slit_1049
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA (553 aa)
     
 
  0.673
Slit_2567
DNA polymerase III, subunit alpha (1189 aa)
   
 
  0.669
Slit_0832
ADP-ribosyl-(dinitrogen reductase) hydrolase (292 aa)
              0.634
Slit_0833
NifQ family protein (185 aa)
              0.632
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (447 aa)
   
 
 
  0.628
Slit_2844
UvrD/REP helicase (722 aa)
   
 
  0.601
Slit_2486
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein (1645 aa)
         
  0.588
Slit_2833
DNA polymerase I (929 aa)
     
 
  0.570
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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