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Slit_0836 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0836" - 4Fe-4S ferredoxin iron-sulfur binding domain protein in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_08364Fe-4S ferredoxin iron-sulfur binding domain protein (84 aa)    
Predicted Functional Partners:
Slit_0835
Nitrogenase-associated protein (171 aa)
 
          0.896
Slit_0834
Ferredoxin (94 aa)
              0.844
Slit_0833
NifQ family protein (185 aa)
 
          0.734
Slit_0837
Nitrogenase cofactor biosynthesis protein NifB (501 aa)
              0.698
Slit_0832
ADP-ribosyl-(dinitrogen reductase) hydrolase (292 aa)
              0.510
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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