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Slit_0844 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0844" - Von Willebrand factor type A in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0844Von Willebrand factor type A (321 aa)    
Predicted Functional Partners:
Slit_0845
Hypothetical protein (150 aa)
 
          0.958
Slit_0846
Hypothetical protein (299 aa)
 
        0.923
Slit_0847
ATPase AAA (330 aa)
 
        0.916
Slit_0842
Hypothetical protein (590 aa)
 
        0.877
Slit_2221
ATPase AAA (305 aa)
 
        0.539
Slit_1176
Alpha-2-macroglobulin domain protein (1969 aa)
   
 
    0.509
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (445 aa)
   
        0.446
ttcA
PP-loop domain protein; Required for the thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32) (284 aa)
   
        0.446
Slit_2416
Cyclic nucleotide-binding protein (430 aa)
   
        0.424
Slit_2006
Serine/threonine protein kinase (801 aa)
   
        0.424
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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