STRINGSTRING
Slit_0907 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0907" - Nitrogen fixation protein in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0907Nitrogen fixation protein (153 aa)    
Predicted Functional Partners:
Slit_0904
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN (499 aa)
 
          0.975
Slit_0905
Dinitrogenase iron-molybdenum cofactor biosynthesis protein (137 aa)
 
          0.972
Slit_0909
Ferredoxin III, nif-specific (96 aa)
 
          0.939
Slit_0903
Nitrogenase MoFe cofactor biosynthesis protein NifE (468 aa)
 
          0.926
Slit_0833
NifQ family protein (185 aa)
 
          0.864
Slit_0811
NifZ family protein (158 aa)
 
          0.864
Slit_0906
Positive regulator of sigma E, RseC/MucC (145 aa)
              0.860
Slit_0882
Nitrogenase molybdenum-iron protein alpha chain (491 aa)
 
          0.859
Slit_0883
Nitrogenase molybdenum-iron protein beta chain (522 aa)
 
          0.857
Slit_0901
LRV FeS4 cluster domain protein (255 aa)
 
          0.825
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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