STRINGSTRING
Slit_0913 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0913" - Hypothetical protein in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0913Hypothetical protein (512 aa)    
Predicted Functional Partners:
Slit_0914
Ankyrin (156 aa)
 
          0.913
Slit_0912
Hypothetical protein (89 aa)
              0.860
Slit_0911
Hypothetical protein (123 aa)
              0.856
Slit_0915
Hypothetical protein (108 aa)
              0.811
Slit_0835
Nitrogenase-associated protein (171 aa)
 
          0.785
Slit_0901
LRV FeS4 cluster domain protein (255 aa)
 
          0.756
Slit_0809
Hypothetical protein (173 aa)
   
          0.753
Slit_0910
Ferredoxin, 2Fe-2S (107 aa)
 
          0.724
Slit_0926
Hypothetical protein (185 aa)
 
          0.662
Slit_0907
Nitrogen fixation protein (153 aa)
 
          0.603
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (9%) [HD]