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Slit_0918 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0918" - Sodium/hydrogen exchanger in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0918Sodium/hydrogen exchanger (470 aa)    
Predicted Functional Partners:
Slit_0442
Sodium/hydrogen exchanger (666 aa)
     
 
  0.864
Slit_0919
Hypothetical protein (145 aa)
              0.815
Slit_2644
Spermidine synthase (879 aa)
   
          0.724
Slit_0917
Hypothetical protein (465 aa)
              0.674
Slit_0161
ATPase P (775 aa)
   
  0.640
Slit_2941
Cation transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (485 aa)
       
 
  0.603
Slit_2830
Globin (151 aa)
   
          0.596
Slit_1154
Methyltransferase type 11 (246 aa)
   
          0.595
apaH
Bis(5’-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (273 aa)
   
      0.590
Slit_2864
ATPase P (902 aa)
     
  0.587
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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