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panB protein (Sideroxydans lithotrophicus) - STRING interaction network
"panB" - 3-methyl-2-oxobutanoate hydroxymethyltransferase in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
panB3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (264 aa)    
Predicted Functional Partners:
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (275 aa)
 
 
  0.998
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (128 aa)
 
   
  0.939
pcnB
poly(A) polymerase; Adds poly(A) tail to the 3’ end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control (447 aa)
   
   
  0.920
ilvD
Dihydroxy-acid dehydratase (616 aa)
     
 
  0.917
Slit_2098
Branched-chain amino acid aminotransferase (306 aa)
         
  0.907
Slit_0948
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (162 aa)
   
   
  0.893
Slit_0949
Deoxynucleoside kinase (213 aa)
              0.883
Slit_0946
HAD-superfamily subfamily IB hydrolase, TIGR01490 (220 aa)
              0.646
trpA
Tryptophan synthase, subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate (265 aa)
         
  0.632
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (743 aa)
   
   
  0.554
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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