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Slit_0976 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0976" - NUDIX hydrolase in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0976NUDIX hydrolase (149 aa)    
Predicted Functional Partners:
Slit_0508
Ribonuclease II (616 aa)
 
  0.956
Slit_0973
aspartyl-tRNA synthetase (598 aa)
   
 
  0.944
rnr
Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (773 aa)
   
  0.936
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (238 aa)
     
 
  0.914
Slit_2224
6-pyruvoyl tetrahydropterin synthase (146 aa)
       
    0.906
folE2
Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate (265 aa)
         
    0.900
Slit_0977
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate (365 aa)
              0.873
Slit_0974
Guanine-specific ribonuclease N1 and T1 (128 aa)
              0.864
Slit_0975
Hypothetical protein (124 aa)
              0.859
clsB
Phospholipase D/transphosphatidylase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (388 aa)
   
      0.806
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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