STRINGSTRING
Slit_0978 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0978" - Endonuclease/exonuclease/phosphatase in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0978Endonuclease/exonuclease/phosphatase (247 aa)    
Predicted Functional Partners:
clsB
Phospholipase D/transphosphatidylase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (388 aa)
 
        0.977
Slit_0976
NUDIX hydrolase (149 aa)
   
      0.787
Slit_0977
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate (365 aa)
              0.763
Slit_0973
aspartyl-tRNA synthetase (598 aa)
              0.763
Slit_0972
Hypothetical protein (212 aa)
              0.667
Slit_0975
Hypothetical protein (124 aa)
              0.664
Slit_0974
Guanine-specific ribonuclease N1 and T1 (128 aa)
              0.664
Slit_0980
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (828 aa)
              0.602
Slit_0971
Regulatory protein, FmdB family (80 aa)
              0.595
Slit_0981
Glucokinase (329 aa)
              0.595
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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