STRINGSTRING
Slit_1018 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1018" - Phosphoesterase PA-phosphatase related protein in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1018Phosphoesterase PA-phosphatase related protein (250 aa)    
Predicted Functional Partners:
Slit_1017
DJ-1 family protein (181 aa)
              0.859
Slit_1016
Hypothetical protein (253 aa)
              0.859
Slit_1019
Hypothetical protein (162 aa)
              0.756
Slit_1015
Hypothetical protein (140 aa)
              0.601
Slit_1014
Cytochrome C (166 aa)
              0.589
Slit_1020
Hypothetical protein (107 aa)
              0.566
Slit_1021
Hypothetical protein (163 aa)
              0.509
argG
Argininosuccinate synthase (408 aa)
              0.470
Slit_1013
Transcriptional regulator (222 aa)
              0.416
Slit_1012
Histidine kinase (447 aa)
              0.416
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (8%) [HD]