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rpsT protein (Sideroxydans lithotrophicus) - STRING interaction network
"rpsT" - Ribosomal protein S20 in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rpsTRibosomal protein S20; Binds directly to 16S ribosomal RNA (87 aa)    
Predicted Functional Partners:
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (89 aa)
   
 
  0.995
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (103 aa)
     
 
  0.993
rpsP
Ribosomal protein S16 (84 aa)
     
 
  0.992
rpsR
Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (89 aa)
   
 
  0.992
rpsI
30S ribosomal protein S9 (130 aa)
     
 
  0.991
rpsB
30S ribosomal protein S2 (240 aa)
   
 
  0.991
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (128 aa)
     
 
  0.991
rpsH
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (131 aa)
   
 
  0.990
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (93 aa)
     
 
  0.990
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (87 aa)
     
 
  0.990
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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