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Slit_1102 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1102" - DEAD/DEAH box helicase domain protein in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1102DEAD/DEAH box helicase domain protein (909 aa)    
Predicted Functional Partners:
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (698 aa)
     
  0.991
Slit_0445
ATP-dependent helicase HrpA (1465 aa)
   
  0.987
Slit_2833
DNA polymerase I (929 aa)
 
 
  0.972
Slit_0670
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (164 aa)
       
    0.950
rhlE
DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA (466 aa)
       
  0.925
Slit_2243
DEAD/DEAH box helicase domain protein (450 aa)
       
  0.925
Slit_1660
DEAD/DEAH box helicase domain protein (511 aa)
       
  0.925
Slit_0667
DEAD/DEAH box helicase domain protein (475 aa)
       
  0.925
Slit_2869
Cold-shock DNA-binding domain protein (68 aa)
       
    0.922
Slit_0967
Cold-shock DNA-binding domain protein (67 aa)
       
    0.922
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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