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Slit_1108 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1108" - Bifunctional deaminase-reductase domain protein in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Slit_1108Bifunctional deaminase-reductase domain protein (196 aa)    
Predicted Functional Partners:
Slit_2833
DNA polymerase I (929 aa)
   
   
  0.735
thyA
Thymidylate synthase; Provides the sole de novo source of dTMP for DNA biosynthesis (264 aa)
   
   
  0.709
Slit_2325
Bifunctional deaminase-reductase domain protein (217 aa)
 
          0.618
Slit_1881
ATP-dependent DNA helicase RecQ (614 aa)
 
      0.596
Slit_2518
Endonuclease/exonuclease/phosphatase (271 aa)
   
          0.571
Slit_2630
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (382 aa)
   
   
  0.542
Slit_0002
DNA polymerase III, subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (367 aa)
     
   
  0.535
Slit_2631
Ribonucleoside-diphosphate reductase, subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (946 aa)
   
   
  0.528
Slit_2241
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (981 aa)
   
   
  0.528
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (366 aa)
           
  0.511
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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