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Slit_1121 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1121" - Cytochrome C class I in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1121Cytochrome C class I (141 aa)    
Predicted Functional Partners:
Slit_1122
Nitric-oxide reductase (458 aa)
 
  0.999
Slit_1129
Nitrite reductase (NO-forming) (577 aa)
 
 
  0.978
Slit_1127
Von Willebrand factor type A (608 aa)
 
   
  0.932
Slit_0411
Cytochrome C oxidase, cbb3-type, subunit I (477 aa)
   
  0.926
Slit_2655
Cytochrome C oxidase (468 aa)
   
  0.926
Slit_1125
ATPase AAA (260 aa)
 
   
  0.923
Slit_1123
Cytochrome C oxidase subunit III (195 aa)
 
   
  0.914
Slit_2654
Cytochrome C oxidase mono-heme subunit/FixO (318 aa)
   
 
  0.837
Slit_0412
Cytochrome C oxidase, cbb3-type, subunit II (265 aa)
   
 
  0.837
Slit_1126
Iron-sulfur cluster-binding protein (322 aa)
 
          0.669
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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