STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1121PFAM: cytochrome c class I; KEGG: mmb:Mmol_1050 putative nitric-oxide reductase subunit C. (141 aa)    
Predicted Functional Partners:
Slit_1122
Nitric-oxide reductase; KEGG: dar:Daro_3191 cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
Slit_1129
Nitrite reductase (NO-forming); KEGG: dar:Daro_3323 cytochrome c, class I:cytochrome d1, heme region; PFAM: cytochrome d1 heme region; cytochrome c class I.
 
 
  0.997
Slit_1123
PFAM: cytochrome c oxidase subunit III; KEGG: tbd:Tbd_0560 putative additional subunit of nitric oxide reductase (Nor) complex, membrane protein.
 
 
 0.959
Slit_1127
KEGG: mmb:Mmol_1055 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
 
  
 0.937
Slit_1125
PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: dar:Daro_3194 ATPase.
 
    0.924
Slit_1697
KEGG: tbd:Tbd_0918 diheme cytochrome SoxA (sulfur oxidation).
   
 
 0.812
Slit_1608
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; KEGG: dar:Daro_0979 NADH dehydrogenase.
   
 
 0.799
Slit_0130
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.758
Slit_1126
KEGG: tbd:Tbd_0556 iron-sulfur cluster-binding protein.
 
    0.739
Slit_0131
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.681
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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