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Slit_1178 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1178" - N-acetylmuramoyl-L-alanine amidase in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
Slit_1178N-acetylmuramoyl-L-alanine amidase (431 aa)    
Predicted Functional Partners:
Slit_1179
Hypothetical protein (127 aa)
   
   
  0.892
queG
Iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) (367 aa)
 
          0.788
Slit_0127
Sporulation domain protein (192 aa)
   
      0.743
Slit_2724
UDP-N-acetylmuramyl-tripeptide synthetase (499 aa)
 
 
  0.655
Slit_1228
Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (794 aa)
     
 
  0.623
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (341 aa)
 
     
  0.619
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (268 aa)
 
 
 
  0.595
Slit_1177
Penicillin-binding protein 1C (781 aa)
              0.565
Slit_0107
Penicillin-binding protein, 1A family (769 aa)
 
 
      0.561
hfq
RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (76 aa)
 
     
  0.539
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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