STRINGSTRING
Slit_1202 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1202" - Response regulator receiver protein in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1202Response regulator receiver protein (559 aa)    
Predicted Functional Partners:
Slit_1201
Histidine kinase (224 aa)
 
          0.807
Slit_0477
Signal transduction protein (290 aa)
   
          0.661
Slit_0550
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) (246 aa)
   
          0.659
Slit_2596
Mannose-sensitive agglutinin (MSHA) (209 aa)
   
          0.620
Slit_0613
YcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (255 aa)
   
          0.618
Slit_2821
VanZ family protein (361 aa)
   
          0.596
Slit_2454
Hypothetical protein (251 aa)
   
          0.596
Slit_0711
Hypothetical protein (869 aa)
   
          0.590
Slit_2597
Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (318 aa)
   
          0.558
Slit_0619
Flagellar protein FlaG protein (123 aa)
   
          0.551
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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