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Slit_1265 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1265" - DNA polymerase III, subunits gamma and tau in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1265DNA polymerase III, subunits gamma and tau (537 aa)    
Predicted Functional Partners:
Slit_2567
DNA polymerase III, subunit alpha (1189 aa)
 
  0.999
Slit_2849
DNA polymerase III, subunit delta (337 aa)
   
  0.998
Slit_0002
DNA polymerase III, subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (367 aa)
 
  0.998
Slit_1536
DNA polymerase III, delta prime subunit (335 aa)
 
0.998
Slit_2411
DNA polymerase III chi subunit HolC (139 aa)
     
  0.992
Slit_1512
DNA polymerase III, subunit epsilon (233 aa)
   
  0.980
Slit_2503
DNA polymerase III, subunit epsilon (235 aa)
     
  0.972
Slit_0800
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (153 aa)
   
 
  0.966
Slit_1965
Single-strand binding protein (162 aa)
     
 
  0.961
Slit_0017
Pyruvate kinase (479 aa)
       
  0.943
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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