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Slit_1276 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1276" - Sigma E regulatory protein, MucB/RseB in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1276Sigma E regulatory protein, MucB/RseB (325 aa)    
Predicted Functional Partners:
Slit_1274
RNA polymerase, sigma-24 subunit, ECF subfamily (199 aa)
 
 
  0.992
Slit_1275
Anti sigma-E protein, RseA (159 aa)
 
          0.956
Slit_1277
Positive regulator of sigma E, RseC/MucC (147 aa)
   
   
  0.955
Slit_1278
Protease Do (465 aa)
   
   
  0.883
Slit_2771
RNA polymerase, sigma-24 subunit, ECF subfamily (207 aa)
   
 
  0.727
Slit_2405
RNA polymerase, sigma-24 subunit, ECF subfamily (199 aa)
   
 
  0.727
Slit_1702
RNA polymerase, sigma-24 subunit, ECF subfamily (186 aa)
   
 
  0.727
Slit_0998
RNA polymerase, sigma-24 subunit, ECF subfamily (177 aa)
   
 
  0.727
Slit_1273
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (529 aa)
         
  0.721
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (597 aa)
   
        0.704
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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